Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | AMED_RS11070 | Not Available | Negative | 2315756 - 2316757 | 36806.1 |
| oxidoreductase | AMED_RS11075 | Not Available | Negative | 2316783 - 2317733 | 32641.9 |
| hypothetical protein | AMED_RS11080 | Not Available | Negative | 2317752 - 2318273 | 19229.8 |
| tetr/acrr family transcriptional regulator | AMED_RS11085 | Not Available | Positive | 2318405 - 2319016 | 22470.8 |
| llm class f420-dependent oxidoreductase | AMED_RS11090 | Not Available | Positive | 2319021 - 2319956 | 33283.3 |
| lipoyl(octanoyl) transferase lipb | AMED_RS11095 | Not Available | Negative | 2320057 - 2320800 | 26861.9 |
| phosphatase pap2 family protein | AMED_RS11100 | Not Available | Negative | 2320797 - 2321420 | 21942.7 |
| tigr01777 family oxidoreductase | AMED_RS11105 | Not Available | Negative | 2321417 - 2322292 | 31110.2 |
| hypothetical protein | AMED_RS49385 | Not Available | Negative | 2322310 - 2322438 | 4452.58 |
| 2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferase | AMED_RS11110 | Not Available | Negative | 2322514 - 2324307 | 61842.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
