Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | AMED_RS11020 | Not Available | Negative | 2299176 - 2299823 | 23303.4 |
| dna polymerase iii subunit alpha | AMED_RS11025 | Not Available | Positive | 2300168 - 2303755 | 131833.0 |
| mfs transporter | AMED_RS11030 | Not Available | Positive | 2303855 - 2305324 | 50733.7 |
| low temperature requirement protein a | AMED_RS11035 | Not Available | Positive | 2305753 - 2306937 | 42023.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2307298 - 2308814 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2309140 - 2312263 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2312336 - 2312452 | Not Available |
| ig-like domain-containing protein | AMED_RS11055 | Not Available | Negative | 2312862 - 2314073 | 42181.3 |
| patatin-like phospholipase family protein | AMED_RS11060 | Not Available | Negative | 2314177 - 2315046 | 30032.7 |
| deda family protein | AMED_RS11065 | Not Available | Negative | 2315064 - 2315711 | 22677.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
