Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | AMED_RS10970 | Not Available | Negative | 2288598 - 2289014 | 14243.1 |
| acyl-coa dehydrogenase family protein | AMED_RS10975 | Not Available | Positive | 2289079 - 2290215 | 40326.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS10980 | Not Available | Positive | 2290255 - 2291202 | 33281.3 |
| aminotransferase class v-fold plp-dependent enzyme | AMED_RS10985 | Not Available | Negative | 2291199 - 2292359 | 41452.9 |
| gntr family transcriptional regulator | AMED_RS10990 | Not Available | Positive | 2292406 - 2293032 | 22805.6 |
| metallophosphoesterase | AMED_RS10995 | Not Available | Positive | 2293029 - 2293787 | 26055.1 |
| coce/nond family hydrolase | AMED_RS11000 | Not Available | Negative | 2293777 - 2295402 | 58462.8 |
| aspartate ammonia-lyase | AMED_RS11005 | Not Available | Negative | 2295453 - 2296844 | 48790.6 |
| asparaginase | AMED_RS11010 | Not Available | Negative | 2296841 - 2297752 | 31118.3 |
| amino acid permease | AMED_RS11015 | Not Available | Negative | 2297749 - 2299179 | 50794.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
