Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | AMED_RS10920 | Not Available | Positive | 2279809 - 2281368 | 57039.8 |
| thif family adenylyltransferase | AMED_RS10925 | Not Available | Negative | 2282110 - 2283576 | 53389.8 |
| hypothetical protein | AMED_RS10930 | Not Available | Negative | 2283558 - 2283938 | 14206.7 |
| multiubiquitin domain-containing protein | AMED_RS10935 | Not Available | Negative | 2283953 - 2284222 | 9586.4 |
| helix-turn-helix domain-containing protein | AMED_RS10940 | Not Available | Positive | 2284330 - 2284686 | 13135.4 |
| imma/irre family metallo-endopeptidase | AMED_RS10945 | Not Available | Positive | 2284692 - 2285267 | 21860.8 |
| hypothetical protein | AMED_RS48595 | Not Available | Negative | 2285274 - 2285567 | 10792.0 |
| mfs transporter | AMED_RS10955 | Not Available | Negative | 2285753 - 2287198 | 48917.3 |
| carboxymuconolactone decarboxylase family protein | AMED_RS10960 | Not Available | Negative | 2287310 - 2287804 | 17600.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS10965 | Not Available | Positive | 2287933 - 2288397 | 16753.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
