Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS10870 | Not Available | Positive | 2271569 - 2272903 | 50655.4 |
| hypothetical protein | AMED_RS10875 | Not Available | Negative | 2272987 - 2273304 | 11757.1 |
| imm1 family immunity protein | AMED_RS10880 | Not Available | Negative | 2273301 - 2273729 | 15386.9 |
| ddda-like double-stranded dna deaminase toxin | AMED_RS10885 | Not Available | Negative | 2273717 - 2274493 | 26913.5 |
| trypsin-like serine protease | AMED_RS10890 | Not Available | Negative | 2274571 - 2275380 | 28340.3 |
| hypothetical protein | AMED_RS10895 | Not Available | Negative | 2275462 - 2275872 | 15072.1 |
| hypothetical protein | AMED_RS10900 | Not Available | Negative | 2275869 - 2276282 | 14401.3 |
| hypothetical protein | AMED_RS10905 | Not Available | Negative | 2276279 - 2276698 | 15125.4 |
| helix-turn-helix transcriptional regulator | AMED_RS10910 | Not Available | Positive | 2277136 - 2278641 | 54056.4 |
| alpha/beta hydrolase | AMED_RS10915 | Not Available | Negative | 2278651 - 2279475 | 29781.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
