Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMED_RS00995 | Not Available | Positive | 208180 - 208665 | 17671.4 |
| helix-turn-helix transcriptional regulator | AMED_RS01000 | Not Available | Negative | 208688 - 209548 | 30942.6 |
| btad domain-containing putative transcriptional regulator | AMED_RS01005 | Not Available | Negative | 209558 - 212659 | 109049.0 |
| degt/dnrj/eryc1/strs aminotransferase family protein | AMED_RS01010 | Not Available | Positive | 212787 - 213920 | 40144.5 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS01015 | Not Available | Positive | 213944 - 214873 | 34082.7 |
| glycosyltransferase family 4 protein | AMED_RS01020 | Not Available | Positive | 214906 - 216102 | 43450.4 |
| daph/dapd/glmu-related protein | AMED_RS01025 | Not Available | Positive | 216089 - 216715 | 22936.2 |
| sige family rna polymerase sigma factor | AMED_RS01030 | Not Available | Positive | 216981 - 217493 | 19108.7 |
| hypothetical protein | AMED_RS01035 | Not Available | Positive | 217490 - 218200 | 24973.9 |
| m20/m25/m40 family metallo-hydrolase | AMED_RS01040 | Not Available | Positive | 218241 - 219626 | 49437.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
