Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS10770 | Not Available | Negative | 2254157 - 2254747 | 20831.5 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS10775 | Not Available | Positive | 2254818 - 2255573 | 25616.3 |
| alpha-hydroxy acid oxidase | AMED_RS10780 | Not Available | Negative | 2255570 - 2256781 | 44379.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | AMED_RS10785 | Not Available | Negative | 2256865 - 2259660 | 102753.0 |
| duf3052 domain-containing protein | AMED_RS10790 | Not Available | Positive | 2260078 - 2260509 | 15350.9 |
| peroxiredoxin | AMED_RS10795 | Not Available | Positive | 2260583 - 2261047 | 16911.8 |
| Trna-val | Not Available | Not Available | Positive | 2261088 - 2261162 | Not Available |
| recombinase family protein | AMED_RS10805 | Not Available | Negative | 2261119 - 2262864 | 64411.4 |
| recombinase family protein | AMED_RS48590 | Not Available | Negative | 2262894 - 2263349 | 16655.5 |
| hypothetical protein | AMED_RS10815 | Not Available | Negative | 2263532 - 2263888 | 12620.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
