Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | AMED_RS10670 | Not Available | Positive | 2233744 - 2234856 | 38402.0 |
| nad(p) transhydrogenase subunit alpha | AMED_RS10675 | Not Available | Positive | 2234862 - 2235164 | 10360.2 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | AMED_RS10680 | Not Available | Positive | 2235161 - 2236549 | 47451.9 |
| lipoate--protein ligase family protein | AMED_RS10685 | Not Available | Positive | 2236546 - 2237277 | 25868.1 |
| histone-like nucleoid-structuring protein lsr2 | AMED_RS10690 | Not Available | Negative | 2237294 - 2237851 | 18572.0 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS10695 | Not Available | Positive | 2238094 - 2239482 | 47680.5 |
| hypothetical protein | AMED_RS10700 | Not Available | Negative | 2239486 - 2241315 | 61611.3 |
| duf3145 domain-containing protein | AMED_RS10705 | Not Available | Positive | 2241586 - 2242089 | 17742.9 |
| hypothetical protein | AMED_RS10710 | Not Available | Positive | 2242121 - 2242720 | 21925.1 |
| beta-ketoacyl synthase | AMED_RS10715 | Not Available | Negative | 2242775 - 2244019 | 42314.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
