Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | AMED_RS10620 | Not Available | Negative | 2222581 - 2225760 | 110020.0 |
| haloacid dehalogenase-like hydrolase | AMED_RS10625 | Not Available | Negative | 2226015 - 2226710 | 24268.6 |
| abc transporter permease | AMED_RS10630 | Not Available | Positive | 2226816 - 2227808 | 33165.8 |
| secondary thiamine-phosphate synthase enzyme yjbq | AMED_RS10635 | Not Available | Negative | 2227746 - 2228156 | 14657.4 |
| response regulator transcription factor | AMED_RS10640 | Not Available | Negative | 2228319 - 2228963 | 23167.9 |
| sensor histidine kinase | AMED_RS10645 | Not Available | Negative | 2228973 - 2230238 | 44866.9 |
| hypothetical protein | AMED_RS10650 | Not Available | Negative | 2230472 - 2230672 | 7300.48 |
| acyl-coa desaturase | AMED_RS10655 | Not Available | Negative | 2230680 - 2231789 | 41865.1 |
| ferredoxin reductase | AMED_RS10660 | Not Available | Negative | 2231800 - 2232867 | 38637.0 |
| tetr family transcriptional regulator | AMED_RS10665 | Not Available | Positive | 2232961 - 2233620 | 24524.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
