Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS10520 | Not Available | Positive | 2204818 - 2205084 | 9735.76 |
| hypothetical protein | AMED_RS10525 | Not Available | Positive | 2205217 - 2205990 | 26954.0 |
| rimk family alpha-l-glutamate ligase | AMED_RS10530 | Not Available | Positive | 2205987 - 2206889 | 32449.1 |
| mbl fold metallo-hydrolase | AMED_RS10535 | Not Available | Negative | 2206879 - 2207772 | 31924.9 |
| lysr family transcriptional regulator | AMED_RS10540 | Not Available | Positive | 2207855 - 2208703 | 30044.1 |
| suppressor of fused domain protein | AMED_RS10545 | Not Available | Negative | 2208707 - 2209261 | 20454.0 |
| fad-binding oxidoreductase | AMED_RS10550 | Not Available | Positive | 2209345 - 2210451 | 37697.7 |
| peroxide stress protein yaaa | AMED_RS10555 | Not Available | Negative | 2210438 - 2211184 | 26263.7 |
| gnat family n-acetyltransferase | AMED_RS10560 | Not Available | Positive | 2211331 - 2212293 | 35398.3 |
| helix-turn-helix transcriptional regulator | AMED_RS10565 | Not Available | Positive | 2212349 - 2213182 | 30781.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
