Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | AMED_RS10420 | Not Available | Positive | 2184107 - 2184934 | 30336.5 |
| voc family protein | AMED_RS10425 | Not Available | Positive | 2184939 - 2185331 | 13933.3 |
| duf4177 domain-containing protein | AMED_RS10430 | Not Available | Negative | 2185575 - 2185781 | 7543.16 |
| gnat family n-acetyltransferase | AMED_RS10435 | Not Available | Positive | 2185882 - 2186736 | 30323.4 |
| penicillin-binding transpeptidase domain-containing protein | AMED_RS10440 | Not Available | Positive | 2186798 - 2188588 | 61244.6 |
| type i methionyl aminopeptidase | AMED_RS10445 | Not Available | Positive | 2188612 - 2189469 | 31185.0 |
| abc transporter permease | AMED_RS10450 | Not Available | Negative | 2189474 - 2190277 | 28655.9 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | AMED_RS10455 | Not Available | Negative | 2190277 - 2191242 | 33884.6 |
| duf4097 family beta strand repeat-containing protein | AMED_RS10460 | Not Available | Negative | 2191268 - 2192110 | 29255.4 |
| hypothetical protein | AMED_RS10465 | Not Available | Negative | 2192166 - 2192654 | 17471.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
