Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-histidine n(alpha)-methyltransferase | AMED_RS10370 | Not Available | Negative | 2173965 - 2174747 | 27765.7 |
| plp-dependent aminotransferase family protein | AMED_RS10375 | Not Available | Positive | 2174776 - 2176230 | 51658.4 |
| mfs transporter | AMED_RS10380 | Not Available | Positive | 2176503 - 2178272 | 62441.0 |
| peptidylprolyl isomerase | AMED_RS10385 | Not Available | Negative | 2178322 - 2178981 | 23278.2 |
| duf2631 domain-containing protein | AMED_RS10390 | Not Available | Negative | 2179007 - 2179264 | 9643.87 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AMED_RS10395 | Not Available | Positive | 2179359 - 2180561 | 41649.6 |
| metal-dependent hydrolase | AMED_RS10400 | Not Available | Positive | 2180565 - 2181792 | 44691.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AMED_RS10405 | Not Available | Positive | 2181906 - 2183057 | 40403.8 |
| trans-aconitate 2-methyltransferase | AMED_RS10410 | Not Available | Positive | 2183125 - 2183748 | 22109.2 |
| hypothetical protein | AMED_RS10415 | Not Available | Negative | 2183737 - 2183991 | 8916.54 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
