Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation family protein | AMED_RS00945 | Not Available | Negative | 197797 - 198825 | 35506.6 |
| hypothetical protein | AMED_RS00950 | Not Available | Positive | 199025 - 199624 | 20796.0 |
| glutathionylspermidine synthase family protein | AMED_RS00955 | Not Available | Positive | 199625 - 200791 | 44430.9 |
| duf350 domain-containing protein | AMED_RS00960 | Not Available | Positive | 200836 - 201288 | 15457.3 |
| haloalkane dehalogenase | AMED_RS00965 | Not Available | Positive | 201328 - 202233 | 32928.9 |
| aspartate aminotransferase family protein | AMED_RS00970 | Not Available | Negative | 202573 - 203865 | 46135.2 |
| serine--trna ligase | AMED_RS00975 | Not Available | Positive | 203984 - 205246 | 46449.9 |
| duf3558 family protein | AMED_RS00980 | Not Available | Positive | 205311 - 206312 | 34441.6 |
| l-2-hydroxyglutarate oxidase | AMED_RS00985 | Not Available | Negative | 206309 - 207496 | 42516.9 |
| tetr/acrr family transcriptional regulator | AMED_RS00990 | Not Available | Positive | 207590 - 208183 | 21596.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
