Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS10320 | Not Available | Negative | 2162984 - 2163577 | 21126.6 |
| arsenate reductase family protein | AMED_RS10325 | Not Available | Positive | 2163631 - 2163984 | 13048.6 |
| threonine synthase | AMED_RS10330 | Not Available | Negative | 2163981 - 2165192 | 42703.6 |
| duf1295 domain-containing protein | AMED_RS10335 | Not Available | Positive | 2165223 - 2166002 | 29073.1 |
| metal-dependent hydrolase | AMED_RS48585 | Not Available | Positive | 2166106 - 2166261 | 5315.39 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS10345 | Not Available | Negative | 2166493 - 2167302 | 26040.9 |
| lysr family transcriptional regulator | AMED_RS10350 | Not Available | Negative | 2167395 - 2168288 | 31716.3 |
| cytochrome p450 | AMED_RS10355 | Not Available | Negative | 2168288 - 2169541 | 46342.4 |
| alpha/beta fold hydrolase | AMED_RS10360 | Not Available | Positive | 2169651 - 2170379 | 24941.1 |
| tetratricopeptide repeat protein | AMED_RS10365 | Not Available | Positive | 2170622 - 2173867 | 116556.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
