Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase family protein | AMED_RS10270 | Not Available | Negative | 2155229 - 2156311 | 38875.2 |
| ycii family protein | AMED_RS10275 | Not Available | Positive | 2156474 - 2156845 | 13800.4 |
| nad(p)h-binding protein | AMED_RS10280 | Not Available | Positive | 2156897 - 2157712 | 28829.3 |
| m48 family metalloprotease | AMED_RS10285 | Not Available | Positive | 2157939 - 2158817 | 32132.9 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS10290 | Not Available | Negative | 2158783 - 2159769 | 34396.7 |
| helix-turn-helix transcriptional regulator | AMED_RS10295 | Not Available | Negative | 2159766 - 2159990 | 8322.04 |
| hypothetical protein | AMED_RS10300 | Not Available | Negative | 2159984 - 2160436 | 16204.0 |
| ycii family protein | AMED_RS10305 | Not Available | Positive | 2160539 - 2160889 | 12219.3 |
| rna polymerase sigma factor | AMED_RS10310 | Not Available | Positive | 2160895 - 2162151 | 45282.7 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS10315 | Not Available | Negative | 2162367 - 2162987 | 21648.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
