Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS10220 | Not Available | Positive | 2144624 - 2145508 | 29915.1 |
| hypothetical protein | AMED_RS10225 | Not Available | Negative | 2145824 - 2147476 | 56454.1 |
| hypothetical protein | AMED_RS10230 | Not Available | Positive | 2147664 - 2147879 | 7534.13 |
| mab_1171c family putative transporter | AMED_RS10235 | Not Available | Negative | 2147899 - 2148999 | 39969.2 |
| imma/irre family metallo-endopeptidase | AMED_RS10240 | Not Available | Negative | 2148996 - 2149511 | 19239.1 |
| molybdopterin-dependent oxidoreductase | AMED_RS10245 | Not Available | Negative | 2149621 - 2151846 | 79773.9 |
| serine hydrolase | AMED_RS10250 | Not Available | Positive | 2151988 - 2153073 | 38172.3 |
| merr family transcriptional regulator | AMED_RS10255 | Not Available | Negative | 2153119 - 2153553 | 16059.5 |
| mfs transporter | AMED_RS10260 | Not Available | Positive | 2153578 - 2154966 | 46925.6 |
| ubiquitin-like small modifier protein 1 | AMED_RS10265 | Not Available | Negative | 2154941 - 2155225 | 10234.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
