Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS10170 | Not Available | Positive | 2134909 - 2135178 | 10026.0 |
| creatininase family protein | AMED_RS10175 | Not Available | Negative | 2135202 - 2135993 | 28277.6 |
| fad-binding oxidoreductase | AMED_RS10180 | Not Available | Negative | 2136004 - 2137338 | 46848.7 |
| nitrate abc transporter substrate-binding protein | AMED_RS10185 | Not Available | Negative | 2137350 - 2138540 | 41317.0 |
| abc transporter permease | AMED_RS10190 | Not Available | Negative | 2138570 - 2139439 | 31256.9 |
| abc transporter atp-binding protein | AMED_RS10195 | Not Available | Negative | 2139439 - 2140206 | 27519.1 |
| amidohydrolase family protein | AMED_RS10200 | Not Available | Negative | 2140218 - 2141468 | 43040.6 |
| helix-turn-helix domain-containing protein | AMED_RS10205 | Not Available | Positive | 2141575 - 2142228 | 23758.3 |
| pdr/vanb family oxidoreductase | AMED_RS10210 | Not Available | Positive | 2142225 - 2143157 | 32780.7 |
| amidohydrolase family protein | AMED_RS10215 | Not Available | Positive | 2143164 - 2144459 | 44050.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
