Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS10120 | Not Available | Positive | 2120324 - 2120902 | 20270.6 |
| abc transporter substrate-binding protein | AMED_RS10125 | Not Available | Positive | 2121090 - 2121887 | 28111.1 |
| transketolase-like tk c-terminal-containing protein | AMED_RS10130 | Not Available | Positive | 2122032 - 2124326 | 81538.1 |
| hypothetical protein | AMED_RS10135 | Not Available | Negative | 2124319 - 2124897 | 20027.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | AMED_RS10140 | Not Available | Positive | 2125053 - 2126159 | 39770.0 |
| hypothetical protein | AMED_RS10145 | Not Available | Positive | 2126194 - 2126460 | 9908.78 |
| hypothetical protein | AMED_RS48240 | Not Available | Positive | 2127124 - 2127420 | 9997.73 |
| pa14 domain-containing protein | AMED_RS10155 | Not Available | Positive | 2127766 - 2134071 | 221625.0 |
| hypothetical protein | AMED_RS10160 | Not Available | Positive | 2134046 - 2134474 | 15830.0 |
| metal-dependent hydrolase | AMED_RS10165 | Not Available | Positive | 2134667 - 2134822 | 5430.64 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
