Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | AMED_RS10070 | Not Available | Positive | 2111916 - 2112791 | 31732.9 |
| translation elongation factor ts | AMED_RS10075 | Not Available | Positive | 2112882 - 2113697 | 29345.0 |
| ump kinase | AMED_RS10080 | Not Available | Positive | 2113815 - 2114558 | 26438.0 |
| ribosome recycling factor | AMED_RS10085 | Not Available | Positive | 2114607 - 2115164 | 20730.7 |
| phosphatidate cytidylyltransferase | AMED_RS10090 | Not Available | Positive | 2115674 - 2116627 | 31999.6 |
| voc family protein | AMED_RS10095 | Not Available | Negative | 2116624 - 2117469 | 30557.8 |
| class i sam-dependent methyltransferase | AMED_RS10100 | Not Available | Positive | 2117583 - 2118392 | 29872.2 |
| padr family transcriptional regulator | AMED_RS10105 | Not Available | Negative | 2118332 - 2118952 | 22164.8 |
| iron abc transporter permease | AMED_RS10110 | Not Available | Positive | 2119112 - 2119648 | 18705.4 |
| iron chelate uptake abc transporter family permease subunit | AMED_RS10115 | Not Available | Positive | 2119929 - 2120315 | 12770.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
