Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | AMED_RS10020 | Not Available | Positive | 2101814 - 2102749 | 33611.2 |
| ribonuclease hii | AMED_RS10025 | Not Available | Positive | 2102840 - 2103682 | 29424.5 |
| duf2469 domain-containing protein | AMED_RS10030 | Not Available | Positive | 2103679 - 2104002 | 12697.9 |
| yran family protein | AMED_RS10035 | Not Available | Positive | 2104277 - 2104654 | 14457.4 |
| yifb family mg chelatase-like aaa atpase | AMED_RS10040 | Not Available | Positive | 2104654 - 2106165 | 52645.6 |
| hypothetical protein | AMED_RS10045 | Not Available | Positive | 2106572 - 2107165 | 20092.7 |
| dna-processing protein dpra | AMED_RS10050 | Not Available | Positive | 2107162 - 2108304 | 39556.2 |
| tyrosine recombinase xerc | AMED_RS10055 | Not Available | Positive | 2108408 - 2109388 | 34455.4 |
| flia/whig family rna polymerase sigma factor | AMED_RS10060 | Not Available | Positive | 2109498 - 2110346 | 30684.5 |
| m23 family metallopeptidase | AMED_RS10065 | Not Available | Negative | 2110347 - 2110982 | 21806.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
