Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | AMED_RS09970 | Not Available | Positive | 2094109 - 2095647 | 54474.2 |
| amidohydrolase family protein | AMED_RS09975 | Not Available | Positive | 2095656 - 2096732 | 37588.9 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS09980 | Not Available | Positive | 2096779 - 2097504 | 25730.5 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS09985 | Not Available | Positive | 2097606 - 2098409 | 28686.5 |
| 30s ribosomal protein s16 | AMED_RS09990 | Not Available | Positive | 2098581 - 2099024 | 16096.3 |
| rna-binding protein | AMED_RS09995 | Not Available | Positive | 2099021 - 2099260 | 8588.37 |
| ribosome maturation factor rimm | AMED_RS10000 | Not Available | Positive | 2099282 - 2099794 | 18327.9 |
| hypothetical protein | AMED_RS10005 | Not Available | Positive | 2099791 - 2100495 | 25742.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | AMED_RS10010 | Not Available | Positive | 2100500 - 2101261 | 27753.1 |
| 50s ribosomal protein l19 | AMED_RS10015 | Not Available | Positive | 2101414 - 2101782 | 14053.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
