Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | AMED_RS09920 | Not Available | Negative | 2084038 - 2085369 | 46288.9 |
| vc0807 family protein | AMED_RS09925 | Not Available | Negative | 2085362 - 2086024 | 24154.0 |
| tetr/acrr family transcriptional regulator | AMED_RS09930 | Not Available | Negative | 2086021 - 2086623 | 21091.9 |
| diguanylate cyclase | AMED_RS09935 | Not Available | Negative | 2086692 - 2087996 | 46531.3 |
| glucose 1-dehydrogenase | AMED_RS09940 | Not Available | Negative | 2088587 - 2089339 | 24974.6 |
| tetr/acrr family transcriptional regulator | AMED_RS09945 | Not Available | Negative | 2089363 - 2089950 | 21175.4 |
| hypothetical protein | AMED_RS09950 | Not Available | Positive | 2090071 - 2090433 | 12092.3 |
| ku protein | AMED_RS09955 | Not Available | Positive | 2090486 - 2091367 | 32140.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS09960 | Not Available | Negative | 2091646 - 2092125 | 17799.2 |
| abc transporter atp-binding protein | AMED_RS09965 | Not Available | Negative | 2092135 - 2093913 | 63431.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
