Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | AMED_RS09870 | Not Available | Negative | 2073659 - 2074945 | 45202.3 |
| voc family protein | AMED_RS09875 | Not Available | Positive | 2075039 - 2075458 | 15417.1 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS09880 | Not Available | Negative | 2075483 - 2076334 | 29670.1 |
| lysr family transcriptional regulator | AMED_RS09885 | Not Available | Positive | 2076405 - 2077313 | 31522.2 |
| sigma-70 family rna polymerase sigma factor | AMED_RS09890 | Not Available | Positive | 2077397 - 2078251 | 30951.1 |
| (2fe-2s)-binding protein | AMED_RS09895 | Not Available | Negative | 2078248 - 2078874 | 21752.3 |
| putative rna methyltransferase | AMED_RS09900 | Not Available | Negative | 2078893 - 2079741 | 30492.4 |
| ammonium transporter | AMED_RS09905 | Not Available | Positive | 2079915 - 2081303 | 47514.9 |
| p-ii family nitrogen regulator | AMED_RS09910 | Not Available | Positive | 2081300 - 2081638 | 12175.7 |
| [protein-pii] uridylyltransferase | AMED_RS09915 | Not Available | Positive | 2081649 - 2083958 | 81753.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
