Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS00900 | Not Available | Positive | 189563 - 191071 | 54743.3 |
| hypothetical protein | AMED_RS47890 | Not Available | Negative | 191075 - 191230 | 5545.98 |
| type i pantothenate kinase | AMED_RS00905 | Not Available | Negative | 191514 - 192446 | 35476.8 |
| macro domain-containing protein | AMED_RS00910 | Not Available | Negative | 192559 - 193179 | 21557.7 |
| prephenate dehydratase | AMED_RS00915 | Not Available | Positive | 193278 - 194186 | 31932.7 |
| histidine phosphatase family protein | AMED_RS00920 | Not Available | Positive | 194183 - 194800 | 21796.0 |
| duf4232 domain-containing protein | AMED_RS00925 | Not Available | Positive | 194918 - 195559 | 21110.8 |
| hypothetical protein | AMED_RS00930 | Not Available | Negative | 195582 - 196058 | 16518.6 |
| mfs transporter | AMED_RS00935 | Not Available | Negative | 196098 - 197345 | 42317.5 |
| metallopeptidase family protein | AMED_RS00940 | Not Available | Negative | 197447 - 197797 | 13092.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
