Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS09825 | Not Available | Negative | 2066137 - 2066697 | 19616.4 |
| isas1 family transposase | AMED_RS09830 | Not Available | Positive | 2066962 - 2068197 | 44323.2 |
| factor-independent urate hydroxylase | AMED_RS09835 | Not Available | Negative | 2068107 - 2068988 | 32368.0 |
| hydroxyisourate hydrolase | AMED_RS09840 | Not Available | Negative | 2068991 - 2069308 | 11205.2 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | AMED_RS09845 | Not Available | Negative | 2069305 - 2069754 | 16012.1 |
| helix-turn-helix domain-containing protein | AMED_RS09850 | Not Available | Negative | 2069834 - 2070310 | 16777.8 |
| allantoinase allb | AMED_RS09855 | Not Available | Positive | 2070541 - 2071869 | 47285.1 |
| allantoicase | AMED_RS09860 | Not Available | Positive | 2071871 - 2072884 | 36957.3 |
| hypothetical protein | AMED_RS47940 | Not Available | Negative | 2072881 - 2073057 | 6073.55 |
| coa-binding protein | AMED_RS09865 | Not Available | Negative | 2073186 - 2073662 | 17209.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
