Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS09775 | Not Available | Positive | 2054757 - 2054978 | 8092.88 |
| duf2786 domain-containing protein | AMED_RS09780 | Not Available | Negative | 2054979 - 2056133 | 41766.7 |
| c4-dicarboxylate transporter dcta | AMED_RS09785 | Not Available | Positive | 2056226 - 2057506 | 44934.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS09790 | Not Available | Negative | 2057503 - 2057991 | 18005.7 |
| pucr family transcriptional regulator | AMED_RS09795 | Not Available | Negative | 2058097 - 2059419 | 46266.6 |
| xanthine dehydrogenase family protein subunit m | AMED_RS09800 | Not Available | Positive | 2059542 - 2060405 | 30156.1 |
| (2fe-2s)-binding protein | AMED_RS09805 | Not Available | Positive | 2060396 - 2060863 | 16337.3 |
| 8-oxoguanine deaminase | AMED_RS09810 | Not Available | Positive | 2060860 - 2062200 | 47114.6 |
| xanthine dehydrogenase subunit d | AMED_RS09815 | Not Available | Positive | 2062197 - 2064458 | 79864.1 |
| ricin-type beta-trefoil lectin domain protein | AMED_RS09820 | Not Available | Negative | 2064445 - 2066022 | 55381.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
