Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3455 domain-containing protein | AMED_RS09725 | Not Available | Negative | 2044422 - 2044922 | 16798.1 |
| sodium:solute symporter | AMED_RS09730 | Not Available | Negative | 2045009 - 2046574 | 55148.5 |
| anhydro-n-acetylmuramic acid kinase | AMED_RS09735 | Not Available | Negative | 2046590 - 2047852 | 42666.2 |
| signal recognition particle-docking protein ftsy | AMED_RS09740 | Not Available | Positive | 2047998 - 2049287 | 44900.9 |
| hypothetical protein | AMED_RS09745 | Not Available | Negative | 2049284 - 2049757 | 16651.2 |
| gnat family n-acetyltransferase | AMED_RS09750 | Not Available | Positive | 2049894 - 2050394 | 18355.7 |
| iclr family transcriptional regulator | AMED_RS09755 | Not Available | Negative | 2050405 - 2051178 | 27273.8 |
| malate synthase a | AMED_RS09760 | Not Available | Positive | 2051291 - 2052868 | 57845.3 |
| duf6986 family protein | AMED_RS09765 | Not Available | Positive | 2052868 - 2054055 | 42733.7 |
| hypothetical protein | AMED_RS09770 | Not Available | Negative | 2054114 - 2054455 | 11966.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
