Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpb | AMED_RS09675 | Not Available | Positive | 2031452 - 2033497 | 71955.6 |
| potassium-transporting atpase subunit c | AMED_RS09680 | Not Available | Positive | 2033504 - 2034094 | 19857.8 |
| duf4118 domain-containing protein | AMED_RS09685 | Not Available | Positive | 2034099 - 2036636 | 89625.7 |
| response regulator | AMED_RS09690 | Not Available | Positive | 2036633 - 2037331 | 25420.5 |
| hypothetical protein | AMED_RS09695 | Not Available | Positive | 2037361 - 2037588 | 7742.63 |
| acyl-coa dehydrogenase family protein | AMED_RS09700 | Not Available | Negative | 2037601 - 2038740 | 40352.7 |
| tetr/acrr family transcriptional regulator | AMED_RS09705 | Not Available | Positive | 2038806 - 2039447 | 23465.2 |
| hypothetical protein | AMED_RS09710 | Not Available | Positive | 2039505 - 2040158 | 20722.5 |
| acylphosphatase | AMED_RS09715 | Not Available | Positive | 2040288 - 2040575 | 10440.2 |
| chromosome segregation protein smc | AMED_RS09720 | Not Available | Positive | 2040744 - 2044346 | 131676.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
