Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-2-deoxygluconokinase | AMED_RS09625 | Not Available | Negative | 2020517 - 2021446 | 32344.6 |
| atp-binding cassette domain-containing protein | AMED_RS09630 | Not Available | Negative | 2021443 - 2022222 | 28148.1 |
| abc transporter permease | AMED_RS09635 | Not Available | Negative | 2022219 - 2023262 | 36567.2 |
| sugar abc transporter substrate-binding protein | AMED_RS09640 | Not Available | Negative | 2023259 - 2024257 | 33767.8 |
| tim barrel protein | AMED_RS09645 | Not Available | Negative | 2024281 - 2025159 | 30913.7 |
| laci family dna-binding transcriptional regulator | AMED_RS09650 | Not Available | Positive | 2025271 - 2026308 | 36679.1 |
| gfo/idh/moca family oxidoreductase | AMED_RS09655 | Not Available | Positive | 2026390 - 2027388 | 34709.0 |
| asparagine synthase (glutamine-hydrolyzing) | AMED_RS09660 | Not Available | Negative | 2027411 - 2029252 | 68857.8 |
| k(+)-transporting atpase subunit f | AMED_RS09665 | Not Available | Positive | 2029655 - 2029756 | 3389.32 |
| potassium-transporting atpase subunit kdpa | AMED_RS09670 | Not Available | Positive | 2029794 - 2031455 | 57010.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
