Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AMED_RS09575 | Not Available | Positive | 2008181 - 2009473 | 45943.1 |
| nad(p)-binding domain-containing protein | AMED_RS09580 | Not Available | Positive | 2009880 - 2010947 | 38591.8 |
| aldo/keto reductase | AMED_RS09585 | Not Available | Negative | 2011091 - 2012140 | 38105.3 |
| tetr/acrr family transcriptional regulator | AMED_RS09590 | Not Available | Positive | 2012240 - 2012815 | 20558.4 |
| discoidin domain-containing protein | AMED_RS09595 | Not Available | Positive | 2013104 - 2014660 | 55106.4 |
| mfs transporter | AMED_RS09600 | Not Available | Positive | 2014669 - 2015901 | 42274.7 |
| pd40 domain-containing protein | AMED_RS09605 | Not Available | Positive | 2015898 - 2016851 | 34211.6 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | AMED_RS09610 | Not Available | Negative | 2016836 - 2018698 | 65584.3 |
| 5-deoxy-glucuronate isomerase | AMED_RS09615 | Not Available | Negative | 2018737 - 2019627 | 32643.2 |
| hypothetical protein | AMED_RS09620 | Not Available | Negative | 2019624 - 2020520 | 31180.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
