Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator c-terminal domain-containing protein | AMED_RS09520 | Not Available | Positive | 1995792 - 1996625 | 29682.5 |
| ntp transferase domain-containing protein | AMED_RS09525 | Not Available | Positive | 1996713 - 1997294 | 19788.7 |
| moxr family atpase | AMED_RS09530 | Not Available | Positive | 1997313 - 1998182 | 32354.9 |
| hypothetical protein | AMED_RS09535 | Not Available | Positive | 1998231 - 2000000 | 62603.9 |
| vwa domain-containing protein | AMED_RS09545 | Not Available | Positive | 2000482 - 2001594 | 39942.9 |
| xdhc/coxi family protein | AMED_RS09550 | Not Available | Positive | 2001587 - 2002699 | 39387.8 |
| (2fe-2s)-binding protein | AMED_RS09555 | Not Available | Positive | 2002904 - 2003428 | 18562.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AMED_RS09560 | Not Available | Positive | 2003428 - 2005869 | 86286.3 |
| xanthine dehydrogenase family protein subunit m | AMED_RS09565 | Not Available | Positive | 2005866 - 2006720 | 29570.2 |
| srpbcc family protein | AMED_RS09570 | Not Available | Positive | 2006819 - 2007733 | 30110.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
