Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AMED_RS09470 | Not Available | Positive | 1987264 - 1988220 | 34229.3 |
| carbohydrate abc transporter permease | AMED_RS09475 | Not Available | Positive | 1988220 - 1989053 | 30216.4 |
| glycoside hydrolase family 27 protein | AMED_RS09480 | Not Available | Positive | 1989230 - 1990384 | 41522.8 |
| coa transferase subunit a | AMED_RS09485 | Not Available | Positive | 1990558 - 1991367 | 29240.0 |
| coa-transferase subunit beta | AMED_RS09490 | Not Available | Positive | 1991364 - 1992122 | 26552.7 |
| thiolase family protein | AMED_RS09495 | Not Available | Positive | 1992119 - 1993300 | 40904.4 |
| protocatechuate 3,4-dioxygenase subunit beta | AMED_RS09500 | Not Available | Positive | 1993311 - 1994048 | 27817.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | AMED_RS09505 | Not Available | Positive | 1994048 - 1994602 | 19883.3 |
| 3-oxoadipate enol-lactonase | AMED_RS09510 | Not Available | Positive | 1994602 - 1995384 | 27574.4 |
| 4-carboxymuconolactone decarboxylase | AMED_RS09515 | Not Available | Positive | 1995381 - 1995782 | 14167.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
