Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf202 domain-containing protein | AMED_RS09420 | Not Available | Negative | 1977997 - 1978293 | 9928.16 |
| yidh family protein | AMED_RS09425 | Not Available | Negative | 1978465 - 1978818 | 12143.1 |
| gtra family protein | AMED_RS09430 | Not Available | Negative | 1978830 - 1979309 | 17150.6 |
| hypothetical protein | AMED_RS09435 | Not Available | Positive | 1979459 - 1979869 | 14838.7 |
| iron-sulfur cluster biosynthesis family protein | AMED_RS09440 | Not Available | Positive | 1979946 - 1980239 | 9814.31 |
| glycerate kinase | AMED_RS09445 | Not Available | Negative | 1980550 - 1981671 | 36937.2 |
| d-glycerate dehydrogenase | AMED_RS09450 | Not Available | Negative | 1981668 - 1982612 | 32802.6 |
| alpha-galactosidase | AMED_RS09455 | Not Available | Negative | 1982643 - 1984739 | 77322.3 |
| rok family protein | AMED_RS09460 | Not Available | Positive | 1984816 - 1985985 | 40090.8 |
| abc transporter substrate-binding protein | AMED_RS09465 | Not Available | Positive | 1986005 - 1987267 | 44786.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
