Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase | AMED_RS09370 | Not Available | Positive | 1968508 - 1969812 | 47102.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS09375 | Not Available | Positive | 1969805 - 1970590 | 26907.8 |
| sugar abc transporter substrate-binding protein | AMED_RS09380 | Not Available | Positive | 1970654 - 1971685 | 35718.9 |
| sugar abc transporter atp-binding protein | AMED_RS09385 | Not Available | Positive | 1971682 - 1973205 | 53740.0 |
| abc transporter permease | AMED_RS09390 | Not Available | Positive | 1973202 - 1974215 | 34624.3 |
| fadr/gntr family transcriptional regulator | AMED_RS09395 | Not Available | Negative | 1974258 - 1975004 | 26617.6 |
| hypothetical protein | AMED_RS09400 | Not Available | Positive | 1975086 - 1975229 | 5332.51 |
| aldo/keto reductase | AMED_RS09405 | Not Available | Positive | 1975235 - 1976203 | 34460.9 |
| amidohydrolase | AMED_RS09410 | Not Available | Positive | 1976200 - 1977051 | 30254.9 |
| rna polymerase sigma factor shba | AMED_RS09415 | Not Available | Negative | 1977087 - 1977674 | 21252.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
