Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS00850 | Not Available | Negative | 179458 - 180084 | 22814.7 |
| excalibur calcium-binding domain-containing protein | AMED_RS00855 | Not Available | Positive | 180370 - 180852 | 16479.7 |
| class f sortase | AMED_RS00860 | Not Available | Positive | 180849 - 181499 | 22226.5 |
| helicase-associated domain-containing protein | AMED_RS00865 | Not Available | Negative | 181469 - 183745 | 80044.2 |
| thermonuclease family protein | AMED_RS00870 | Not Available | Negative | 183760 - 184563 | 26540.5 |
| 3'-5' exonuclease | AMED_RS00875 | Not Available | Positive | 184755 - 186140 | 46729.1 |
| duf3024 domain-containing protein | AMED_RS00880 | Not Available | Positive | 186211 - 186549 | 12859.3 |
| nucleotide pyrophosphohydrolase | AMED_RS00885 | Not Available | Negative | 186546 - 186863 | 11778.9 |
| nitrate- and nitrite sensing domain-containing protein | AMED_RS00890 | Not Available | Positive | 186999 - 187919 | 32909.8 |
| duf6880 family protein | AMED_RS00895 | Not Available | Positive | 188008 - 189336 | 48987.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
