Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | AMED_RS09320 | Not Available | Positive | 1957497 - 1958819 | 46172.5 |
| metal-dependent hydrolase | AMED_RS09325 | Not Available | Positive | 1958832 - 1959398 | 19812.3 |
| hypothetical protein | AMED_RS09330 | Not Available | Negative | 1959395 - 1961185 | 63751.1 |
| sdr family oxidoreductase | AMED_RS09335 | Not Available | Negative | 1961498 - 1963477 | 70384.4 |
| hypothetical protein | AMED_RS09340 | Not Available | Negative | 1963601 - 1963801 | 7021.35 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS09345 | Not Available | Positive | 1964007 - 1965230 | 42991.8 |
| merr family transcriptional regulator | AMED_RS09350 | Not Available | Negative | 1965199 - 1965942 | 27297.8 |
| hypothetical protein | AMED_RS09355 | Not Available | Positive | 1965997 - 1966251 | 9203.68 |
| multidrug effflux mfs transporter | AMED_RS09360 | Not Available | Negative | 1966241 - 1967446 | 40858.2 |
| fumarylacetoacetate hydrolase family protein | AMED_RS09365 | Not Available | Positive | 1967654 - 1968505 | 30024.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
