Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | AMED_RS09220 | Not Available | Negative | 1937571 - 1938095 | 18414.4 |
| glutamine synthetase family protein | AMED_RS09225 | Not Available | Positive | 1938325 - 1939671 | 48928.5 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | AMED_RS09230 | Not Available | Positive | 1939673 - 1940377 | 24998.8 |
| aldehyde dehydrogenase | AMED_RS09235 | Not Available | Positive | 1940374 - 1941741 | 48359.4 |
| 3-oxoacyl-acp reductase | AMED_RS09240 | Not Available | Positive | 1941741 - 1942508 | 26762.8 |
| hypothetical protein | AMED_RS09245 | Not Available | Negative | 1942505 - 1942702 | 7321.17 |
| helix-turn-helix transcriptional regulator | AMED_RS09250 | Not Available | Positive | 1942775 - 1944079 | 47415.1 |
| aminomethyl-transferring glycine dehydrogenase | AMED_RS09255 | Not Available | Positive | 1944406 - 1947255 | 100701.0 |
| glycine cleavage system aminomethyltransferase gcvt | AMED_RS09260 | Not Available | Positive | 1947259 - 1948350 | 38676.0 |
| glycine cleavage system protein gcvh | AMED_RS09265 | Not Available | Positive | 1948363 - 1948740 | 13319.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
