Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | AMED_RS09170 | Not Available | Positive | 1927785 - 1928534 | 26193.3 |
| polysaccharide lyase 6 family protein | AMED_RS09175 | Not Available | Positive | 1928622 - 1929977 | 46917.6 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | AMED_RS09180 | Not Available | Positive | 1930036 - 1930905 | 32165.4 |
| helix-turn-helix domain-containing protein | AMED_RS09185 | Not Available | Positive | 1930964 - 1931398 | 16109.0 |
| hypothetical protein | AMED_RS09190 | Not Available | Positive | 1931892 - 1932377 | 17366.8 |
| mab_1171c family putative transporter | AMED_RS09195 | Not Available | Positive | 1932374 - 1933552 | 41620.3 |
| smp-30/gluconolactonase/lre family protein | AMED_RS09200 | Not Available | Negative | 1933769 - 1934671 | 33194.3 |
| padr family transcriptional regulator | AMED_RS09205 | Not Available | Positive | 1934769 - 1935092 | 11751.0 |
| duf1700 domain-containing protein | AMED_RS09210 | Not Available | Positive | 1935089 - 1936315 | 43492.4 |
| alpha/beta fold hydrolase | AMED_RS09215 | Not Available | Positive | 1936399 - 1937361 | 34366.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
