Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMED_RS09120 | Not Available | Positive | 1916435 - 1920214 | 135018.0 |
| aaa family atpase | AMED_RS09125 | Not Available | Negative | 1920425 - 1922539 | 77899.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | AMED_RS09130 | Not Available | Positive | 1922734 - 1923294 | 18942.5 |
| pantetheine-phosphate adenylyltransferase | AMED_RS09135 | Not Available | Positive | 1923338 - 1923823 | 17868.5 |
| ribonuclease domain-containing protein | AMED_RS09140 | Not Available | Positive | 1923965 - 1924657 | 24193.2 |
| sige family rna polymerase sigma factor | AMED_RS09145 | Not Available | Positive | 1924721 - 1925221 | 18800.6 |
| hypothetical protein | AMED_RS09150 | Not Available | Positive | 1925221 - 1925892 | 23732.6 |
| diviva domain-containing protein | AMED_RS09155 | Not Available | Positive | 1926005 - 1926733 | 26401.3 |
| duf177 domain-containing protein | AMED_RS09160 | Not Available | Positive | 1926914 - 1927501 | 21145.0 |
| 50s ribosomal protein l32 | AMED_RS09165 | Not Available | Positive | 1927589 - 1927771 | 6710.21 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
