Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | AMED_RS09070 | Not Available | Negative | 1906837 - 1907874 | 35967.7 |
| mce family protein | AMED_RS09075 | Not Available | Negative | 1907871 - 1908863 | 35504.1 |
| mce family protein | AMED_RS09080 | Not Available | Negative | 1908860 - 1909864 | 35394.5 |
| mce family protein | AMED_RS09085 | Not Available | Negative | 1909861 - 1911135 | 44442.4 |
| abc transporter permease | AMED_RS09090 | Not Available | Negative | 1911132 - 1911983 | 30041.9 |
| abc transporter permease | AMED_RS09095 | Not Available | Negative | 1911985 - 1912779 | 27644.3 |
| llm class flavin-dependent oxidoreductase | AMED_RS09100 | Not Available | Negative | 1913245 - 1914237 | 35406.1 |
| fad-dependent monooxygenase | AMED_RS09105 | Not Available | Negative | 1914246 - 1915625 | 48930.0 |
| helix-turn-helix domain-containing protein | AMED_RS09110 | Not Available | Positive | 1915683 - 1915886 | 7194.42 |
| clp protease n-terminal domain-containing protein | AMED_RS09115 | Not Available | Positive | 1915888 - 1916358 | 16623.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
