Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6801 domain-containing protein | AMED_RS09020 | Not Available | Negative | 1897548 - 1898159 | 20528.5 |
| duf6801 domain-containing protein | AMED_RS09025 | Not Available | Negative | 1898211 - 1898792 | 19128.8 |
| duf6801 domain-containing protein | AMED_RS09030 | Not Available | Negative | 1898812 - 1900230 | 47910.8 |
| duf6801 domain-containing protein | AMED_RS09035 | Not Available | Negative | 1900309 - 1900947 | 20970.7 |
| hypothetical protein | AMED_RS09040 | Not Available | Positive | 1901371 - 1902267 | 29555.6 |
| hypothetical protein | AMED_RS09045 | Not Available | Negative | 1902307 - 1902954 | 21776.5 |
| hypothetical protein | AMED_RS09050 | Not Available | Negative | 1903034 - 1903978 | 31722.3 |
| hypothetical protein | AMED_RS09055 | Not Available | Negative | 1903975 - 1904478 | 17374.6 |
| mce family protein | AMED_RS09060 | Not Available | Negative | 1904466 - 1905674 | 42349.1 |
| mce family protein | AMED_RS09065 | Not Available | Negative | 1905674 - 1906762 | 37879.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
