Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythromycin esterase family protein | AMED_RS08970 | Not Available | Positive | 1883964 - 1885097 | 39755.5 |
| caspase family protein | AMED_RS49380 | Not Available | Positive | 1885152 - 1887608 | 84000.1 |
| s8 family peptidase | AMED_RS08980 | Not Available | Positive | 1887667 - 1888536 | 28790.3 |
| isas1 family transposase | AMED_RS08985 | Not Available | Positive | 1888751 - 1889974 | 44245.2 |
| hypothetical protein | AMED_RS08990 | Not Available | Positive | 1890128 - 1890346 | 8259.92 |
| pyruvate carboxylase | AMED_RS08995 | Not Available | Positive | 1890460 - 1893837 | 120867.0 |
| arginase family protein | AMED_RS09000 | Not Available | Positive | 1893854 - 1894636 | 26948.2 |
| gntr family transcriptional regulator | AMED_RS09005 | Not Available | Negative | 1894641 - 1895015 | 13010.5 |
| hypothetical protein | AMED_RS09010 | Not Available | Negative | 1895012 - 1895713 | 24524.1 |
| cdar family transcriptional regulator | AMED_RS09015 | Not Available | Positive | 1896021 - 1897304 | 46329.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
