Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS08920 | Not Available | Positive | 1874757 - 1875236 | 17587.8 |
| glycoside hydrolase family 27 protein | AMED_RS08925 | Not Available | Negative | 1875223 - 1876446 | 43349.8 |
| gamma carbonic anhydrase family protein | AMED_RS08930 | Not Available | Positive | 1876581 - 1877111 | 18482.1 |
| uracil-dna glycosylase | AMED_RS08935 | Not Available | Positive | 1877142 - 1877819 | 24483.3 |
| alpha/beta fold hydrolase | AMED_RS08940 | Not Available | Positive | 1877881 - 1878678 | 27825.8 |
| 50s ribosomal protein l28 | AMED_RS08945 | Not Available | Negative | 1878807 - 1878998 | 6845.39 |
| dak2 domain-containing protein | AMED_RS08950 | Not Available | Positive | 1879133 - 1880707 | 53133.5 |
| atp-dependent dna helicase recg | AMED_RS08955 | Not Available | Positive | 1880711 - 1882864 | 78152.4 |
| gnat family n-acetyltransferase | AMED_RS08960 | Not Available | Positive | 1882861 - 1883337 | 17366.6 |
| tetr/acrr family transcriptional regulator | AMED_RS08965 | Not Available | Negative | 1883297 - 1883932 | 22202.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
