Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding protein | AMED_RS08870 | Not Available | Negative | 1864926 - 1865450 | 17816.0 |
| ferric reductase-like transmembrane domain-containing protein | AMED_RS08875 | Not Available | Negative | 1865459 - 1866805 | 48822.9 |
| response regulator transcription factor | AMED_RS08880 | Not Available | Positive | 1866953 - 1867666 | 26168.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS08885 | Not Available | Positive | 1867663 - 1869084 | 50214.9 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS08890 | Not Available | Negative | 1869056 - 1869712 | 23193.6 |
| plp-dependent aminotransferase family protein | AMED_RS08895 | Not Available | Positive | 1869793 - 1871157 | 47348.0 |
| d-alanine--d-alanine ligase family protein | AMED_RS08900 | Not Available | Positive | 1871718 - 1872812 | 38645.1 |
| duf3515 domain-containing protein | AMED_RS08905 | Not Available | Negative | 1872809 - 1873345 | 18073.8 |
| lrp/asnc family transcriptional regulator | AMED_RS08910 | Not Available | Negative | 1873413 - 1873646 | 8014.67 |
| thiamine-phosphate kinase | AMED_RS08915 | Not Available | Positive | 1873784 - 1874740 | 32468.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
