Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | AMED_RS00800 | Not Available | Negative | 166632 - 167804 | 43057.4 |
| hypothetical protein | AMED_RS00805 | Not Available | Positive | 167890 - 168744 | 30116.2 |
| iclr family transcriptional regulator | AMED_RS00810 | Not Available | Positive | 168741 - 169385 | 21648.3 |
| duf998 domain-containing protein | AMED_RS00815 | Not Available | Negative | 169382 - 170044 | 23097.8 |
| tmem165/gdt1 family protein | AMED_RS00820 | Not Available | Negative | 170101 - 170688 | 20138.1 |
| s41 family peptidase | AMED_RS00825 | Not Available | Positive | 170875 - 171834 | 34631.5 |
| cytochrome ubiquinol oxidase subunit i | AMED_RS00830 | Not Available | Positive | 171914 - 173389 | 53736.4 |
| cytochrome d ubiquinol oxidase subunit ii | AMED_RS00835 | Not Available | Positive | 173504 - 174511 | 36252.8 |
| thiol reductant abc exporter subunit cydc | AMED_RS00840 | Not Available | Positive | 174598 - 177771 | 108791.0 |
| gaf domain-containing protein | AMED_RS00845 | Not Available | Positive | 177819 - 179261 | 49231.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
