Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| btad domain-containing putative transcriptional regulator | AMED_RS08820 | Not Available | Positive | 1852770 - 1855583 | 100591.0 |
| nudix hydrolase | AMED_RS08825 | Not Available | Negative | 1855740 - 1856693 | 34185.5 |
| rna degradosome polyphosphate kinase | AMED_RS08830 | Not Available | Negative | 1856690 - 1859071 | 87549.1 |
| 2-phospho-l-lactate guanylyltransferase | AMED_RS08835 | Not Available | Negative | 1859127 - 1859747 | 21048.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMED_RS08840 | Not Available | Positive | 1860331 - 1861050 | 26125.6 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | AMED_RS08845 | Not Available | Positive | 1861050 - 1862066 | 34984.9 |
| cysteine dioxygenase family protein | AMED_RS08850 | Not Available | Positive | 1862252 - 1862731 | 17856.0 |
| asparaginase | AMED_RS08855 | Not Available | Negative | 1862736 - 1863719 | 33683.4 |
| voc family protein | AMED_RS08860 | Not Available | Negative | 1863746 - 1864126 | 13879.3 |
| fad:protein fmn transferase | AMED_RS08865 | Not Available | Negative | 1864189 - 1864929 | 26213.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
