Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sbcc/mukb-like walker b domain-containing protein | AMED_RS08770 | Not Available | Positive | 1842751 - 1843323 | 19974.8 |
| hypothetical protein | AMED_RS08775 | Not Available | Positive | 1843320 - 1844297 | 35034.6 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMED_RS08780 | Not Available | Positive | 1844492 - 1846546 | 72320.6 |
| hypothetical protein | AMED_RS08785 | Not Available | Negative | 1846551 - 1847129 | 19624.3 |
| hypothetical protein | AMED_RS08790 | Not Available | Negative | 1847182 - 1847436 | 8887.84 |
| mbl fold metallo-hydrolase | AMED_RS08795 | Not Available | Negative | 1847527 - 1848234 | 25359.1 |
| iclr family transcriptional regulator | AMED_RS08800 | Not Available | Negative | 1848278 - 1848979 | 24344.3 |
| 3-isopropylmalate dehydratase large subunit | AMED_RS08805 | Not Available | Positive | 1849122 - 1850555 | 51170.0 |
| 3-isopropylmalate dehydratase small subunit | AMED_RS08810 | Not Available | Positive | 1850577 - 1851179 | 22212.2 |
| hu family dna-binding protein | AMED_RS08815 | Not Available | Positive | 1851412 - 1852197 | 26452.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
