Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase b | AMED_RS08720 | Not Available | Negative | 1828819 - 1830354 | 52739.7 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS08725 | Not Available | Positive | 1830788 - 1832245 | 53237.7 |
| hypothetical protein | AMED_RS08730 | Not Available | Positive | 1832242 - 1833315 | 38822.8 |
| tetr/acrr family transcriptional regulator | AMED_RS08735 | Not Available | Positive | 1833343 - 1833942 | 21388.7 |
| lsr2 family protein | AMED_RS08740 | Not Available | Negative | 1834117 - 1834530 | 14876.4 |
| hypothetical protein | AMED_RS08745 | Not Available | Negative | 1834779 - 1834964 | 6455.14 |
| hu family dna-binding protein | AMED_RS08750 | Not Available | Negative | 1835595 - 1836272 | 23012.8 |
| atp-binding protein | AMED_RS08755 | Not Available | Positive | 1836915 - 1838666 | 62319.8 |
| exonuclease sbccd subunit d | AMED_RS08760 | Not Available | Positive | 1838698 - 1839858 | 41473.1 |
| aaa family atpase | AMED_RS08765 | Not Available | Positive | 1839860 - 1842754 | 100682.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
