Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | AMED_RS08670 | Not Available | Negative | 1817669 - 1818916 | 46039.0 |
| had family hydrolase | AMED_RS08675 | Not Available | Positive | 1819417 - 1820151 | 26431.7 |
| Trna-gln | Not Available | Not Available | Positive | 1820202 - 1820273 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1820375 - 1820450 | Not Available |
| hu family dna-binding protein | AMED_RS08690 | Not Available | Positive | 1820930 - 1821607 | 22740.5 |
| tetratricopeptide repeat protein | AMED_RS08695 | Not Available | Negative | 1821826 - 1824774 | 106864.0 |
| helix-turn-helix domain-containing protein | AMED_RS08700 | Not Available | Negative | 1824960 - 1825871 | 32428.5 |
| hypothetical protein | AMED_RS08705 | Not Available | Negative | 1825884 - 1826093 | 7309.93 |
| sam-dependent methyltransferase | AMED_RS08710 | Not Available | Positive | 1827368 - 1828234 | 32238.0 |
| duf6292 family protein | AMED_RS08715 | Not Available | Negative | 1828328 - 1828711 | 13643.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
