Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMED_RS08620 | Not Available | Negative | 1803076 - 1803957 | 32045.8 |
| ankyrin repeat domain-containing protein | AMED_RS08625 | Not Available | Negative | 1804028 - 1805344 | 47350.6 |
| tigr03620 family f420-dependent llm class oxidoreductase | AMED_RS08630 | Not Available | Negative | 1805643 - 1806467 | 29338.9 |
| tigr03620 family f420-dependent llm class oxidoreductase | AMED_RS08635 | Not Available | Negative | 1806464 - 1807360 | 31983.1 |
| tetr/acrr family transcriptional regulator | AMED_RS08640 | Not Available | Positive | 1807451 - 1808014 | 20741.8 |
| phosphoglycerate dehydrogenase | AMED_RS08645 | Not Available | Positive | 1808140 - 1809738 | 55457.6 |
| s8 family serine peptidase | AMED_RS08650 | Not Available | Positive | 1809969 - 1813346 | 114634.0 |
| 3-isopropylmalate dehydrogenase | AMED_RS08655 | Not Available | Positive | 1813575 - 1814612 | 36443.4 |
| citramalate synthase | AMED_RS08660 | Not Available | Positive | 1815148 - 1816752 | 56785.3 |
| fumarylacetoacetate hydrolase family protein | AMED_RS08665 | Not Available | Positive | 1816831 - 1817601 | 27031.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
